Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative prohead protease | NCTC12722_02685 | Not Available | Negative | 2748724 - 2749215 | 18292.3 |
| uncharacterised protein | NCTC12722_02686 | Not Available | Negative | 2749278 - 2749457 | 6749.34 |
| uncharacterised protein | NCTC12722_02687 | Not Available | Negative | 2749461 - 2749658 | 7597.27 |
| Portal protein | NCTC12722_02689 | Not Available | Negative | 2749907 - 2751082 | 42879.0 |
| Terminase large subunit | NCTC12722_02690 | Not Available | Negative | 2751096 - 2752406 | 48072.7 |
| Tail-like protein | NCTC12722_03265 | Not Available | Negative | 3363140 - 3364054 | 31409.0 |
| Transposase/is protein | NCTC12722_03266 | Not Available | Negative | 3364182 - 3365045 | 31629.7 |
| Is21 transposase | NCTC12722_03267 | Not Available | Negative | 3365045 - 3366544 | 56549.3 |
| Attl | Not Available | Not Available | Positive | 3365242 - 3365254 | Not Available |
| uncharacterised protein | NCTC12722_03268 | Not Available | Negative | 3366635 - 3366841 | 7816.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
