Afipia felis

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia felis is a Gram-negative, rod-shaped bacterium primarily found in hospital water environments. This organism is aerobically metabolizing, indicating that it requires oxygen for its growth and survival. The presence of A. felis in hospital water suggests a potential link to healthcare-associated environments, which may facilitate its persistence in these settings. As a member of the microbial community residing in hospital water systems, A. felis may play a role in the complex interactions between microorganisms and their aquatic habitats. Its aerobic nature likely contributes to the dynamics of nutrient cycling within these environments, influencing the overall microbial diversity and potentially affecting water quality. Further research on A. felis could provide insights into its ecological role and adaptive mechanisms in hospital water systems, which are critical for maintaining hygiene and preventing the proliferation of other opportunistic pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia felis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Afipia felis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital water
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia felis strain NCTC12722 genome assembly, contig:

Gene Summary

Adenine Count

827163 bp

Thymine Count

828388 bp

Guanine Count

1281645 bp

Cytosine Count

1278803 bp

Genome Length

4215999 bp

Protein-coding Genes

4035 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkanesulfonate transporter substrate-binding subunitNCTC12722_02909Not AvailableNegative2991802 - 299281236169.8
putative aliphatic sulfonates transport permease protein ssucNCTC12722_02910Not AvailableNegative2992875 - 299377132481.3
bicarbonate transport atp-binding protein cmpdNCTC12722_02911Not AvailableNegative2993764 - 299456129935.7
methylmalonate-semialdehyde dehydrogenaseNCTC12722_02912Not AvailableNegative2994998 - 299649753980.7
cysji operon transcriptional activatorNCTC12722_02913Not AvailablePositive2996634 - 299752133413.3
serine/threonine-protein kinase pkndNCTC12722_02914Not AvailableNegative2997560 - 299863339053.5
spectinomycin tetracycline efflux pumpNCTC12722_02915Not AvailablePositive2998862 - 300024448063.8
acyl-coa dehydrogenase, short-chain specificNCTC12722_02916Not AvailablePositive3000351 - 300213562727.7
4-chlorobenzoyl coenzyme a dehalogenase-2NCTC12722_02917Not AvailablePositive3002292 - 300303826780.4
histone deacetylase-like amidohydrolaseNCTC12722_02918Not AvailablePositive3003090 - 300402233811.2

Displaying genes 2941 – 2950 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Cat scratch diseaseCausesPMC34658
Cat-scratch disease (csd)CausesPMC4276836
Cat scratch diseaseCausesPMC4398416

Displaying health effects 1 – 3 of 3 in total