Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon monoxide dehydrogenase medium chain | NCTC12722_02859 | Not Available | Negative | 2941439 - 2942359 | 32591.3 |
| l-threonine 3-dehydrogenase | NCTC12722_02860 | Not Available | Negative | 2942504 - 2943673 | 41660.0 |
| acetate operon repressor | NCTC12722_02861 | Not Available | Negative | 2943700 - 2944560 | 30714.9 |
| sulfite exporter taue/safe | NCTC12722_02862 | Not Available | Positive | 2944774 - 2945628 | 30204.4 |
| putative formate dehydrogenase sa2102 | NCTC12722_02863 | Not Available | Negative | 2945744 - 2948512 | 101684.0 |
| nadh-quinone oxidoreductase subunit 1 | NCTC12722_02864 | Not Available | Negative | 2948509 - 2950746 | 81770.3 |
| sulfate transport system permease protein cysw | NCTC12722_02865 | Not Available | Positive | 2950921 - 2951793 | 31014.8 |
| arginine transport atp-binding protein artm | NCTC12722_02866 | Not Available | Positive | 2951796 - 2952518 | 25626.2 |
| accessory colonization factor acfc, contains abc-type periplasmic domain | NCTC12722_02867 | Not Available | Positive | 2952532 - 2953362 | 29716.7 |
| molybdopterin molybdenumtransferase | NCTC12722_02868 | Not Available | Negative | 2953428 - 2955347 | 67014.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
