Afipia felis

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia felis is a Gram-negative, rod-shaped bacterium primarily found in hospital water environments. This organism is aerobically metabolizing, indicating that it requires oxygen for its growth and survival. The presence of A. felis in hospital water suggests a potential link to healthcare-associated environments, which may facilitate its persistence in these settings. As a member of the microbial community residing in hospital water systems, A. felis may play a role in the complex interactions between microorganisms and their aquatic habitats. Its aerobic nature likely contributes to the dynamics of nutrient cycling within these environments, influencing the overall microbial diversity and potentially affecting water quality. Further research on A. felis could provide insights into its ecological role and adaptive mechanisms in hospital water systems, which are critical for maintaining hygiene and preventing the proliferation of other opportunistic pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia felis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Afipia felis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital water
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia felis strain NCTC12722 genome assembly, contig:

Gene Summary

Adenine Count

827163 bp

Thymine Count

828388 bp

Guanine Count

1281645 bp

Cytosine Count

1278803 bp

Genome Length

4215999 bp

Protein-coding Genes

4035 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative dna ligase-like protein rv0938/mt0965NCTC12722_02839Not AvailableNegative2914195 - 291588663325.2
ribonuclease ttha0252NCTC12722_02840Not AvailableNegative2915883 - 291693237457.8
atp-dependent helicaseNCTC12722_02841Not AvailablePositive2916998 - 291960796351.6
metallophosphoesterase, dna ligase-associatedNCTC12722_02842Not AvailablePositive2919604 - 292029925367.3
response regulator protein vrarNCTC12722_02843Not AvailableNegative2920329 - 292097923215.5
autoinducer 2 sensor kinase/phosphatase luxqNCTC12722_02844Not AvailableNegative2920976 - 2924509128342.0
serine chemoreceptor proteinNCTC12722_02845Not AvailableNegative2924886 - 292656859373.4
methyl-accepting chemotaxis protein 4NCTC12722_02846Not AvailableNegative2926605 - 292706616892.2
3-oxoadipate enol-lactonase 2NCTC12722_02847Not AvailableNegative2927270 - 292804628045.8
predicted metal-dependent enzyme of the double-stranded beta helix superfamilyNCTC12722_02848Not AvailableNegative2928088 - 292866321019.9

Displaying genes 2871 – 2880 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Cat scratch diseaseCausesPMC34658
Cat-scratch disease (csd)CausesPMC4276836
Cat scratch diseaseCausesPMC4398416

Displaying health effects 1 – 3 of 3 in total