Afipia felis

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia felis is a Gram-negative, rod-shaped bacterium primarily found in hospital water environments. This organism is aerobically metabolizing, indicating that it requires oxygen for its growth and survival. The presence of A. felis in hospital water suggests a potential link to healthcare-associated environments, which may facilitate its persistence in these settings. As a member of the microbial community residing in hospital water systems, A. felis may play a role in the complex interactions between microorganisms and their aquatic habitats. Its aerobic nature likely contributes to the dynamics of nutrient cycling within these environments, influencing the overall microbial diversity and potentially affecting water quality. Further research on A. felis could provide insights into its ecological role and adaptive mechanisms in hospital water systems, which are critical for maintaining hygiene and preventing the proliferation of other opportunistic pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia felis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Afipia felis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital water
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia felis strain NCTC12722 genome assembly, contig:

Gene Summary

Adenine Count

827163 bp

Thymine Count

828388 bp

Guanine Count

1281645 bp

Cytosine Count

1278803 bp

Genome Length

4215999 bp

Protein-coding Genes

4035 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hth-type transcriptional regulator gltcNCTC12722_02807Not AvailableNegative2873027 - 287394133112.6
protoporphyrinogen oxidaseNCTC12722_02808Not AvailablePositive2874024 - 287551154036.7
cyclic di-gmp phosphodiesterase gmrNCTC12722_02809Not AvailableNegative2875508 - 287792588020.3
fumarate and nitrate reduction regulatory proteinNCTC12722_02810Not AvailableNegative2878190 - 287893928062.0
uncharacterised proteinNCTC12722_02811Not AvailablePositive2879404 - 28796197837.27
succinyl-coa ligaseNCTC12722_02812Not AvailableNegative2879649 - 288053930971.8
succinyl-coa ligaseNCTC12722_02813Not AvailableNegative2880536 - 288166339443.7
succinate-semialdehyde dehydrogenase (acetylating)NCTC12722_02814Not AvailableNegative2881674 - 288310151570.1
d-galactonate transporterNCTC12722_02815Not AvailableNegative2883178 - 288446146551.4
tripartite tricarboxylate transporter tcta familyNCTC12722_02816Not AvailableNegative2884666 - 288618353241.8

Displaying genes 2841 – 2850 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Cat scratch diseaseCausesPMC34658
Cat-scratch disease (csd)CausesPMC4276836
Cat scratch diseaseCausesPMC4398416

Displaying health effects 1 – 3 of 3 in total