Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf3298) | NCTC12722_02727 | Not Available | Positive | 2780798 - 2781592 | 28757.1 |
| pyrrolidone-carboxylate peptidase | NCTC12722_02728 | Not Available | Positive | 2781589 - 2782257 | 24832.2 |
| twin-arg-translocated uncharacterized repeat protein | NCTC12722_02729 | Not Available | Positive | 2782567 - 2783928 | 46738.5 |
| uncharacterised protein | NCTC12722_02730 | Not Available | Negative | 2783884 - 2784219 | 12438.8 |
| thermophilic serine proteinase precursor | NCTC12722_02731 | Not Available | Negative | 2784453 - 2785880 | 49019.7 |
| uncharacterised protein | NCTC12722_02732 | Not Available | Negative | 2785920 - 2786582 | 22751.2 |
| rna polymerase sigma factor sigx | NCTC12722_02733 | Not Available | Negative | 2786579 - 2787289 | 26515.8 |
| stalked cell differentiation-controlling protein | NCTC12722_02734 | Not Available | Positive | 2787410 - 2788606 | 44257.3 |
| uncharacterized protein conserved in bacteria (duf2336) | NCTC12722_02735 | Not Available | Positive | 2788659 - 2789771 | 39914.0 |
| protein of uncharacterised function (duf992) | NCTC12722_02736 | Not Available | Negative | 2789968 - 2790438 | 16009.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
