Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccmh precursor | NCTC12722_02651 | Not Available | Negative | 2721102 - 2721593 | 18316.4 |
| cytochrome c-type biogenesis protein ccmf | NCTC12722_02652 | Not Available | Negative | 2721598 - 2723586 | 71548.5 |
| heme chaperone ccme | NCTC12722_02653 | Not Available | Negative | 2723583 - 2724059 | 16939.5 |
| formate-dependent nitrite reductase complex subunit nrfg | NCTC12722_02654 | Not Available | Negative | 2724118 - 2725221 | 39538.5 |
| uncharacterised protein | NCTC12722_02655 | Not Available | Negative | 2725337 - 2726722 | 50894.1 |
| uncharacterised protein | NCTC12722_02656 | Not Available | Positive | 2726725 - 2726949 | 7693.29 |
| sensor protein phoq | NCTC12722_02657 | Not Available | Negative | 2726871 - 2728256 | 50398.8 |
| transcriptional regulatory protein phop | NCTC12722_02658 | Not Available | Negative | 2728246 - 2728923 | 25352.3 |
| uncharacterised protein | NCTC12722_02659 | Not Available | Negative | 2729063 - 2729377 | 11695.2 |
| uncharacterised protein | NCTC12722_02660 | Not Available | Negative | 2729544 - 2729795 | 8412.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
