Afipia felis

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia felis is a Gram-negative, rod-shaped bacterium primarily found in hospital water environments. This organism is aerobically metabolizing, indicating that it requires oxygen for its growth and survival. The presence of A. felis in hospital water suggests a potential link to healthcare-associated environments, which may facilitate its persistence in these settings. As a member of the microbial community residing in hospital water systems, A. felis may play a role in the complex interactions between microorganisms and their aquatic habitats. Its aerobic nature likely contributes to the dynamics of nutrient cycling within these environments, influencing the overall microbial diversity and potentially affecting water quality. Further research on A. felis could provide insights into its ecological role and adaptive mechanisms in hospital water systems, which are critical for maintaining hygiene and preventing the proliferation of other opportunistic pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia felis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Afipia felis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital water
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia felis strain NCTC12722 genome assembly, contig:

Gene Summary

Adenine Count

827163 bp

Thymine Count

828388 bp

Guanine Count

1281645 bp

Cytosine Count

1278803 bp

Genome Length

4215999 bp

Protein-coding Genes

4035 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted secreted (periplasmic) protein (duf2159)NCTC12722_00189Not AvailableNegative203732 - 20428620384.4
leucine--trna ligaseNCTC12722_00190Not AvailableNegative204273 - 20689497554.2
bacteriophytochrome cph2NCTC12722_00191Not AvailableNegative207001 - 20869261532.5
predicted enzyme with a tim-barrel foldNCTC12722_00192Not AvailablePositive208801 - 20949324941.3
uncharacterized protein conserved in bacteriaNCTC12722_00193Not AvailableNegative209509 - 21007821674.1
transcriptional regulatory protein walrNCTC12722_00194Not AvailablePositive210199 - 21088525170.1
dna-binding transcriptional dual regulator crpNCTC12722_00195Not AvailablePositive210951 - 21139115783.0
exodeoxyribonuclease iiiNCTC12722_00196Not AvailableNegative211414 - 21222930679.8
lipoprotein chaperoneNCTC12722_00197Not AvailableNegative212311 - 21317431213.2
dna translocase ftskNCTC12722_00198Not AvailableNegative213258 - 21571188462.2

Displaying genes 261 – 270 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Cat scratch diseaseCausesPMC34658
Cat-scratch disease (csd)CausesPMC4276836
Cat scratch diseaseCausesPMC4398416

Displaying health effects 1 – 3 of 3 in total