Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable trna-dihydrouridine synthase | NCTC12722_02621 | Not Available | Negative | 2683692 - 2684651 | 34866.2 |
| liv-i protein f | NCTC12722_02622 | Not Available | Negative | 2684798 - 2685535 | 26257.4 |
| lipopolysaccharide export system atp-binding protein lptb | NCTC12722_02623 | Not Available | Negative | 2685532 - 2686266 | 26258.1 |
| leucine/isoleucine/valine transporter permease subunit | NCTC12722_02624 | Not Available | Negative | 2686263 - 2687210 | 33460.0 |
| liv-i protein h | NCTC12722_02625 | Not Available | Negative | 2687207 - 2688070 | 30192.2 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor | NCTC12722_02626 | Not Available | Negative | 2688119 - 2689336 | 43680.9 |
| formyl-coenzyme a transferase | NCTC12722_02627 | Not Available | Negative | 2689540 - 2690814 | 46268.5 |
| oxalyl-coa decarboxylase | NCTC12722_02628 | Not Available | Negative | 2690891 - 2692630 | 61137.4 |
| uncharacterised protein | NCTC12722_02629 | Not Available | Positive | 2693149 - 2693310 | 5734.91 |
| oxalate:formate exchange protein | NCTC12722_02630 | Not Available | Positive | 2693288 - 2694592 | 46860.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
