Afipia felis

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia felis is a Gram-negative, rod-shaped bacterium primarily found in hospital water environments. This organism is aerobically metabolizing, indicating that it requires oxygen for its growth and survival. The presence of A. felis in hospital water suggests a potential link to healthcare-associated environments, which may facilitate its persistence in these settings. As a member of the microbial community residing in hospital water systems, A. felis may play a role in the complex interactions between microorganisms and their aquatic habitats. Its aerobic nature likely contributes to the dynamics of nutrient cycling within these environments, influencing the overall microbial diversity and potentially affecting water quality. Further research on A. felis could provide insights into its ecological role and adaptive mechanisms in hospital water systems, which are critical for maintaining hygiene and preventing the proliferation of other opportunistic pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia felis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Afipia felis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital water
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia felis strain NCTC12722 genome assembly, contig:

Gene Summary

Adenine Count

827163 bp

Thymine Count

828388 bp

Guanine Count

1281645 bp

Cytosine Count

1278803 bp

Genome Length

4215999 bp

Protein-coding Genes

4035 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxylate/amino acid/amine transporterNCTC12722_02581Not AvailableNegative2640760 - 264165031028.1
hth-type transcriptional regulator norgNCTC12722_02582Not AvailablePositive2641744 - 264314450471.5
putrescine-binding periplasmic protein precursorNCTC12722_02583Not AvailableNegative2643157 - 264424840183.1
dap-atNCTC12722_02584Not AvailableNegative2644259 - 264541042265.9
inner membrane protein ygapNCTC12722_02585Not AvailableNegative2645462 - 264579411441.6
potassium transport protein kupNCTC12722_02586Not AvailableNegative2645886 - 264780868732.7
potassium transport protein kupNCTC12722_02587Not AvailableNegative2647918 - 264981968822.2
chemotaxis protein motbNCTC12722_02588Not AvailableNegative2649984 - 265081130434.5
chemotaxis protein motaNCTC12722_02589Not AvailableNegative2650842 - 265161527857.4
uncharacterised proteinNCTC12722_02590Not AvailablePositive2651832 - 26520446892.81

Displaying genes 2641 – 2650 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Cat scratch diseaseCausesPMC34658
Cat-scratch disease (csd)CausesPMC4276836
Cat scratch diseaseCausesPMC4398416

Displaying health effects 1 – 3 of 3 in total