Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized abc transporter atp-binding protein hi_1252 | NCTC12722_02551 | Not Available | Positive | 2607545 - 2609356 | 65891.5 |
| l-galactonate transporter | NCTC12722_02552 | Not Available | Negative | 2609363 - 2610562 | 41126.3 |
| hth-type transcriptional activator cmpr | NCTC12722_02553 | Not Available | Negative | 2610740 - 2611636 | 32454.6 |
| inner membrane transport protein ynfm | NCTC12722_02554 | Not Available | Positive | 2611732 - 2612949 | 42503.9 |
| leucine abc transporter subunit substrate-binding protein livk | NCTC12722_02555 | Not Available | Negative | 2613027 - 2614226 | 42768.8 |
| dihydropyrimidine dehydrogenase subunit a | NCTC12722_02556 | Not Available | Negative | 2614341 - 2615564 | 43231.2 |
| 2-(hydroxymethyl)glutarate dehydrogenase | NCTC12722_02557 | Not Available | Negative | 2615579 - 2616466 | 29923.0 |
| uncharacterized hth-type transcriptional regulator yvdt | NCTC12722_02558 | Not Available | Negative | 2616560 - 2617186 | 22212.8 |
| arabinose efflux permease | NCTC12722_02559 | Not Available | Positive | 2617322 - 2618605 | 45906.6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | NCTC12722_02560 | Not Available | Positive | 2618642 - 2619904 | 43274.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
