Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | NCTC12722_02531 | Not Available | Negative | 2588087 - 2589766 | 61754.8 |
| quaternary ammonium compound-resistance protein suge | NCTC12722_02532 | Not Available | Positive | 2589911 - 2590225 | 10649.7 |
| leucine/isoleucine/valine transporter permease subunit | NCTC12722_02533 | Not Available | Negative | 2590321 - 2591289 | 35042.8 |
| liv-i protein h | NCTC12722_02534 | Not Available | Negative | 2591291 - 2592154 | 30842.1 |
| liv-i protein f | NCTC12722_02535 | Not Available | Negative | 2592156 - 2592872 | 26213.1 |
| lipopolysaccharide export system atp-binding protein lptb | NCTC12722_02536 | Not Available | Negative | 2592865 - 2593623 | 27798.6 |
| uncharacterised protein | NCTC12722_02537 | Not Available | Positive | 2593872 - 2594504 | 24241.2 |
| putative reductase | NCTC12722_02538 | Not Available | Negative | 2594529 - 2594906 | 13937.0 |
| methylated-dna--protein-cysteine methyltransferase, constitutive | NCTC12722_02539 | Not Available | Negative | 2594986 - 2595543 | 20109.9 |
| uncharacterised protein | NCTC12722_02540 | Not Available | Positive | 2595674 - 2596309 | 23470.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
