Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase sura | NCTC12722_02501 | Not Available | Positive | 2558316 - 2559260 | 34892.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase 1 | NCTC12722_02502 | Not Available | Positive | 2559266 - 2560276 | 35113.3 |
| ribosomal rna small subunit methyltransferase a | NCTC12722_02503 | Not Available | Positive | 2560273 - 2561127 | 31165.8 |
| alcohol dehydrogenase | NCTC12722_02504 | Not Available | Positive | 2561137 - 2562201 | 37541.7 |
| uncharacterised protein | NCTC12722_02505 | Not Available | Positive | 2562427 - 2563473 | 36287.3 |
| guanylate kinase | NCTC12722_02506 | Not Available | Negative | 2563370 - 2564020 | 24614.2 |
| yicc-like family, n-terminal region | NCTC12722_02507 | Not Available | Negative | 2564026 - 2564913 | 31912.0 |
| putative aminodeoxychorismate lyase | NCTC12722_02508 | Not Available | Negative | 2565034 - 2566392 | 48664.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | NCTC12722_02509 | Not Available | Negative | 2566484 - 2567749 | 44063.7 |
| acyl carrier protein acpp | NCTC12722_02510 | Not Available | Negative | 2567834 - 2568073 | 8573.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
