Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | NCTC12722_02481 | Not Available | Positive | 2535299 - 2536528 | 45870.1 |
| uncharacterised protein | NCTC12722_02482 | Not Available | Negative | 2536549 - 2537682 | 39201.8 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | NCTC12722_02483 | Not Available | Negative | 2537830 - 2539362 | 56048.5 |
| polyphosphate kinase | NCTC12722_02484 | Not Available | Negative | 2539379 - 2541565 | 81956.9 |
| dnaa regulatory inactivator hda | NCTC12722_02485 | Not Available | Negative | 2541737 - 2542438 | 25310.5 |
| putative cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 | NCTC12722_02486 | Not Available | Negative | 2542435 - 2543043 | 21661.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | NCTC12722_02487 | Not Available | Positive | 2543134 - 2544204 | 36971.9 |
| phosphoribosylglycinamide formyltransferase | NCTC12722_02488 | Not Available | Positive | 2544213 - 2544866 | 23305.2 |
| uncharacterized protein with a c-terminal omp (outer membrane protein) domain | NCTC12722_02489 | Not Available | Positive | 2544999 - 2546081 | 37502.9 |
| integral membrane protein, yjbe family | NCTC12722_02490 | Not Available | Negative | 2546071 - 2546907 | 29525.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
