Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable dna endonuclease smra | NCTC12722_00169 | Not Available | Negative | 181778 - 182386 | 22312.0 |
| membrane-bound lytic murein transglycosylase a precursor | NCTC12722_00170 | Not Available | Negative | 182383 - 183810 | 52795.9 |
| uncharacterized protein conserved in bacteria | NCTC12722_00171 | Not Available | Negative | 183752 - 184456 | 25649.2 |
| protein-export protein secb | NCTC12722_00172 | Not Available | Positive | 184723 - 185199 | 17176.5 |
| dna polymerase iii subunit epsilon | NCTC12722_00173 | Not Available | Negative | 185250 - 185942 | 26056.1 |
| dephospho-coa kinase | NCTC12722_00174 | Not Available | Negative | 185978 - 186577 | 21626.1 |
| septum formation protein maf | NCTC12722_00175 | Not Available | Negative | 186587 - 187195 | 21540.0 |
| putative phosphotransferase yqfl | NCTC12722_00176 | Not Available | Negative | 187199 - 188050 | 31434.0 |
| predicted membrane protein | NCTC12722_00177 | Not Available | Positive | 188517 - 189008 | 19027.2 |
| transcription termination factor rho | NCTC12722_00178 | Not Available | Positive | 189282 - 190547 | 47096.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
