Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantothenate kinase | NCTC12722_00159 | Not Available | Negative | 174376 - 175332 | 36573.1 |
| phosphoribosyl-atp pyrophosphatase | NCTC12722_00160 | Not Available | Negative | 175405 - 175734 | 11728.1 |
| imidazole glycerol phosphate synthase subunit hisf | NCTC12722_00161 | Not Available | Negative | 175813 - 176589 | 27638.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | NCTC12722_00162 | Not Available | Negative | 176589 - 177326 | 25688.2 |
| imidazole glycerol phosphate synthase subunit hish 1 | NCTC12722_00163 | Not Available | Negative | 177323 - 177973 | 23715.7 |
| protein of uncharacterised function (duf2628) | NCTC12722_00164 | Not Available | Negative | 177970 - 178461 | 18361.3 |
| imidazoleglycerol-phosphate dehydratase | NCTC12722_00165 | Not Available | Negative | 178491 - 179084 | 21293.5 |
| atp-dependent protease subunit hslv | NCTC12722_00166 | Not Available | Positive | 179277 - 179828 | 19693.6 |
| protein of uncharacterised function (duf2585) | NCTC12722_00167 | Not Available | Positive | 179825 - 180433 | 22347.9 |
| unfoldase hslu | NCTC12722_00168 | Not Available | Positive | 180473 - 181774 | 47501.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
