Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | NCTC12722_01629 | Not Available | Negative | 1648604 - 1649059 | 16907.3 |
| uncharacterised protein | NCTC12722_01630 | Not Available | Positive | 1649204 - 1649527 | 11915.9 |
| uncharacterised protein | NCTC12722_01631 | Not Available | Negative | 1649601 - 1649849 | 8718.89 |
| uncharacterized protein conserved in bacteria | NCTC12722_01632 | Not Available | Negative | 1650005 - 1651075 | 38579.0 |
| uncharacterised protein | NCTC12722_01633 | Not Available | Positive | 1651258 - 1651680 | 14839.3 |
| probable amino-acid-binding protein yxem precursor | NCTC12722_01634 | Not Available | Positive | 1651793 - 1652926 | 41571.5 |
| uncharacterised protein | NCTC12722_01635 | Not Available | Positive | 1653020 - 1653583 | 21500.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | NCTC12722_01636 | Not Available | Negative | 1653656 - 1654408 | 25611.8 |
| helix-turn-helix domain | NCTC12722_01637 | Not Available | Positive | 1654492 - 1654809 | 11459.1 |
| cold-shock dead box protein a | NCTC12722_01638 | Not Available | Negative | 1654838 - 1656787 | 72009.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
