Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system h protein | NCTC12722_01568 | Not Available | Negative | 1590481 - 1590846 | 12955.0 |
| aminomethyltransferase | NCTC12722_01569 | Not Available | Negative | 1590855 - 1592003 | 40713.1 |
| alanine--trna ligase | NCTC12722_01571 | Not Available | Positive | 1592440 - 1595100 | 95325.6 |
| uncharacterized inner membrane transporter yije | NCTC12722_01572 | Not Available | Positive | 1595127 - 1596041 | 31986.3 |
| universal stress protein family | NCTC12722_01573 | Not Available | Negative | 1596115 - 1596990 | 31935.1 |
| inner membrane protein ybal | NCTC12722_01574 | Not Available | Positive | 1597153 - 1598841 | 59544.1 |
| uncharacterised protein | NCTC12722_01575 | Not Available | Negative | 1598897 - 1599712 | 30373.9 |
| isocitrate dehydrogenase | NCTC12722_01576 | Not Available | Negative | 1600044 - 1601264 | 45207.3 |
| uncharacterized trna/rrna methyltransferase hi_0380 | NCTC12722_01577 | Not Available | Positive | 1601405 - 1602916 | 56203.4 |
| cyanate hydratase | NCTC12722_01578 | Not Available | Positive | 1603083 - 1603571 | 17988.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
