Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport periplasmic protein lpta | NCTC12722_00079 | Not Available | Negative | 87465 - 88214 | 25651.8 |
| uncharacterized protein conserved in bacteria | NCTC12722_00080 | Not Available | Negative | 88246 - 88953 | 25474.5 |
| ribonuclease d | NCTC12722_00081 | Not Available | Negative | 89057 - 89671 | 22677.1 |
| maltodextrin phosphorylase | NCTC12722_00082 | Not Available | Positive | 89980 - 92445 | 92127.9 |
| methyl-accepting chemotaxis protein 4 | NCTC12722_00083 | Not Available | Negative | 92517 - 94202 | 59726.7 |
| domain of uncharacterised function (duf930) | NCTC12722_00084 | Not Available | Negative | 94424 - 94816 | 14536.3 |
| chromate transporter, chromate ion transporter (chr) family | NCTC12722_00085 | Not Available | Negative | 94957 - 96147 | 40964.9 |
| putative endoribonuclease l-psp | NCTC12722_00086 | Not Available | Negative | 96293 - 96757 | 16037.4 |
| glycine oxidase | NCTC12722_00087 | Not Available | Negative | 96826 - 98085 | 45307.7 |
| alanine racemase, biosynthetic | NCTC12722_00088 | Not Available | Negative | 98082 - 99233 | 40843.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
