Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate biosynthesis protein alga | NCTC12722_01476 | Not Available | Positive | 1501328 - 1502737 | 51379.9 |
| 1,5-anhydro-d-fructose reductase | NCTC12722_01477 | Not Available | Positive | 1502899 - 1503891 | 35228.6 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | NCTC12722_01478 | Not Available | Positive | 1503929 - 1505071 | 40275.4 |
| integral membrane protein mvin | NCTC12722_01479 | Not Available | Positive | 1505116 - 1506645 | 54076.3 |
| chrd domain | NCTC12722_01480 | Not Available | Negative | 1506672 - 1507097 | 14371.3 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | NCTC12722_01481 | Not Available | Positive | 1507229 - 1508029 | 27652.2 |
| demethylmenaquinone methyltransferase | NCTC12722_01482 | Not Available | Positive | 1508126 - 1508773 | 23241.2 |
| udp-2,3-diacylglucosamine hydrolase | NCTC12722_01483 | Not Available | Positive | 1508828 - 1509640 | 30758.6 |
| gdp-mannose-dependent alpha-mannosyltransferase | NCTC12722_01484 | Not Available | Positive | 1509640 - 1510665 | 37048.8 |
| l-threonine dehydratase catabolic tdcb | NCTC12722_01485 | Not Available | Positive | 1510710 - 1511702 | 34505.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
