Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a export atp-binding/permease protein msba | NCTC12722_01466 | Not Available | Negative | 1490248 - 1492068 | 66105.2 |
| udp-glucose 4-epimerase | NCTC12722_01467 | Not Available | Negative | 1492132 - 1493145 | 36083.1 |
| lipopolysaccharide heptosyltransferase 1 | NCTC12722_01468 | Not Available | Positive | 1493333 - 1494292 | 34346.6 |
| d,d-heptose 1,7-bisphosphate phosphatase | NCTC12722_01469 | Not Available | Negative | 1494293 - 1494814 | 19446.9 |
| phosphoheptose isomerase | NCTC12722_01470 | Not Available | Negative | 1494811 - 1495404 | 20643.7 |
| adp-heptose--lps heptosyltransferase 2 | NCTC12722_01471 | Not Available | Negative | 1495466 - 1496551 | 39192.4 |
| adp-l-glycero-d-manno-heptose-6-epimerase | NCTC12722_01472 | Not Available | Positive | 1496704 - 1497684 | 36328.1 |
| bifunctional protein hlde | NCTC12722_01473 | Not Available | Positive | 1497692 - 1499164 | 52793.2 |
| uncharacterised protein family (upf0104) | NCTC12722_01474 | Not Available | Negative | 1499177 - 1500133 | 34716.6 |
| dtdp-glucose 4,6-dehydratase | NCTC12722_01475 | Not Available | Positive | 1500281 - 1501297 | 38083.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
