Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family | NCTC12722_01446 | Not Available | Positive | 1469471 - 1470097 | 21530.1 |
| voltage-gated clc-type chloride channel clcb | NCTC12722_01447 | Not Available | Negative | 1470154 - 1471920 | 62128.3 |
| csbd-like | NCTC12722_01448 | Not Available | Negative | 1472094 - 1472495 | 14218.8 |
| uncharacterised protein | NCTC12722_01449 | Not Available | Positive | 1472623 - 1472817 | 7113.23 |
| phosphoenolpyruvate carboxylase | NCTC12722_01450 | Not Available | Positive | 1472938 - 1475739 | 104371.0 |
| uncharacterised protein | NCTC12722_01451 | Not Available | Negative | 1475754 - 1475975 | 8214.76 |
| bifunctional uroporphyrinogen-iii synthetase/response regulator domain protein | NCTC12722_01452 | Not Available | Negative | 1476116 - 1476964 | 30102.3 |
| formyltetrahydrofolate deformylase | NCTC12722_01453 | Not Available | Positive | 1477094 - 1477957 | 32316.8 |
| leucine abc transporter subunit substrate-binding protein livk | NCTC12722_01454 | Not Available | Positive | 1477963 - 1479141 | 41729.6 |
| uncharacterised protein | NCTC12722_01455 | Not Available | Positive | 1479313 - 1480251 | 34253.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
