Afipia felis

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia felis is a Gram-negative, rod-shaped bacterium primarily found in hospital water environments. This organism is aerobically metabolizing, indicating that it requires oxygen for its growth and survival. The presence of A. felis in hospital water suggests a potential link to healthcare-associated environments, which may facilitate its persistence in these settings. As a member of the microbial community residing in hospital water systems, A. felis may play a role in the complex interactions between microorganisms and their aquatic habitats. Its aerobic nature likely contributes to the dynamics of nutrient cycling within these environments, influencing the overall microbial diversity and potentially affecting water quality. Further research on A. felis could provide insights into its ecological role and adaptive mechanisms in hospital water systems, which are critical for maintaining hygiene and preventing the proliferation of other opportunistic pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia felis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Afipia felis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital water
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afipia felis strain NCTC12722 genome assembly, contig:

Gene Summary

Adenine Count

827163 bp

Thymine Count

828388 bp

Guanine Count

1281645 bp

Cytosine Count

1278803 bp

Genome Length

4215999 bp

Protein-coding Genes

4035 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ketol-acid reductoisomeraseNCTC12722_01376Not AvailablePositive1411749 - 141276837137.7
putative kinase inhibitor proteinNCTC12722_01377Not AvailablePositive1412876 - 141344219510.2
6-aminohexanoate-dimer hydrolaseNCTC12722_01378Not AvailableNegative1413551 - 141481646212.4
polyphosphate:nucleotide phosphotransferase, ppk2 familyNCTC12722_01379Not AvailablePositive1414960 - 141601240061.0
2-isopropylmalate synthaseNCTC12722_01380Not AvailablePositive1416377 - 141793656211.8
c4-dicarboxylate-binding periplasmic protein precursorNCTC12722_01381Not AvailablePositive1418109 - 141911336506.1
trap-type c4-dicarboxylate transport system, small permease componentNCTC12722_01382Not AvailablePositive1419234 - 141981521613.8
neu5ac permeaseNCTC12722_01383Not AvailablePositive1419812 - 142113747489.6
domain of uncharacterised function (duf1520)NCTC12722_01384Not AvailablePositive1421243 - 142181521087.9
Trna-lysNot AvailableNot AvailablePositive1422026 - 1422101Not Available

Displaying genes 1441 – 1450 of 4126 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Cat scratch diseaseCausesPMC34658
Cat-scratch disease (csd)CausesPMC4276836
Cat scratch diseaseCausesPMC4398416

Displaying health effects 1 – 3 of 3 in total