Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | NCTC12722_01376 | Not Available | Positive | 1411749 - 1412768 | 37137.7 |
| putative kinase inhibitor protein | NCTC12722_01377 | Not Available | Positive | 1412876 - 1413442 | 19510.2 |
| 6-aminohexanoate-dimer hydrolase | NCTC12722_01378 | Not Available | Negative | 1413551 - 1414816 | 46212.4 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | NCTC12722_01379 | Not Available | Positive | 1414960 - 1416012 | 40061.0 |
| 2-isopropylmalate synthase | NCTC12722_01380 | Not Available | Positive | 1416377 - 1417936 | 56211.8 |
| c4-dicarboxylate-binding periplasmic protein precursor | NCTC12722_01381 | Not Available | Positive | 1418109 - 1419113 | 36506.1 |
| trap-type c4-dicarboxylate transport system, small permease component | NCTC12722_01382 | Not Available | Positive | 1419234 - 1419815 | 21613.8 |
| neu5ac permease | NCTC12722_01383 | Not Available | Positive | 1419812 - 1421137 | 47489.6 |
| domain of uncharacterised function (duf1520) | NCTC12722_01384 | Not Available | Positive | 1421243 - 1421815 | 21087.9 |
| Trna-lys | Not Available | Not Available | Positive | 1422026 - 1422101 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
