Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized fad-linked oxidoreductase rv2280 | NCTC12722_01356 | Not Available | Positive | 1391825 - 1393234 | 50452.4 |
| putative assembly protein | NCTC12722_01357 | Not Available | Positive | 1393373 - 1396282 | 101975.0 |
| uncharacterised protein | NCTC12722_01358 | Not Available | Negative | 1396279 - 1396599 | 11806.2 |
| uncharacterised protein | NCTC12722_01359 | Not Available | Negative | 1396873 - 1397163 | 10504.4 |
| uncharacterised protein | NCTC12722_01360 | Not Available | Negative | 1397144 - 1397290 | 5538.85 |
| fumarate hydratase class ii | NCTC12722_01361 | Not Available | Negative | 1397566 - 1398969 | 50169.3 |
| uncharacterized protein conserved in bacteria | NCTC12722_01362 | Not Available | Negative | 1399101 - 1399619 | 19215.5 |
| Tmrna,resume consensus sequence (at 197): aatagttgcaaacgacaa | Not Available | Not Available | Positive | 1399890 - 1400222 | Not Available |
| chromate transporter, chromate ion transporter (chr) family | NCTC12722_01364 | Not Available | Positive | 1400414 - 1401010 | 21129.6 |
| chromate transporter, chromate ion transporter (chr) family | NCTC12722_01365 | Not Available | Positive | 1401007 - 1401540 | 18371.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
