Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diapolycopene oxygenase | NCTC12722_01346 | Not Available | Negative | 1379772 - 1381373 | 57638.0 |
| spermidine synthase | NCTC12722_01347 | Not Available | Positive | 1381530 - 1383797 | 81525.4 |
| putative l,d-transpeptidase ykud | NCTC12722_01348 | Not Available | Negative | 1383825 - 1384616 | 29448.5 |
| uncharacterised protein | NCTC12722_01349 | Not Available | Positive | 1384834 - 1385148 | 10843.1 |
| na+/panthothenate symporter | NCTC12722_01350 | Not Available | Negative | 1385221 - 1386720 | 52567.1 |
| protein of uncharacterised function (duf3311) | NCTC12722_01351 | Not Available | Negative | 1386748 - 1386924 | 7129.92 |
| inner membrane transport permease yadh | NCTC12722_01352 | Not Available | Negative | 1387052 - 1387813 | 27782.9 |
| daunorubicin/doxorubicin resistance atp-binding protein drra | NCTC12722_01353 | Not Available | Negative | 1387810 - 1388733 | 33802.9 |
| dna helicase ii | NCTC12722_01354 | Not Available | Negative | 1388825 - 1391281 | 90789.6 |
| small integral membrane protein | NCTC12722_01355 | Not Available | Positive | 1391534 - 1391710 | 5947.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
