Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel/cobalt efflux protein rcna | NCTC12722_01285 | Not Available | Positive | 1309360 - 1310055 | 24693.6 |
| aliphatic amidase expression-regulating protein | NCTC12722_01286 | Not Available | Positive | 1310326 - 1311654 | 48188.6 |
| liv-i protein h | NCTC12722_01287 | Not Available | Positive | 1311752 - 1313365 | 56860.7 |
| leucine/isoleucine/valine transporter permease subunit | NCTC12722_01288 | Not Available | Positive | 1313365 - 1314528 | 41735.6 |
| lipopolysaccharide export system atp-binding protein lptb | NCTC12722_01289 | Not Available | Positive | 1314532 - 1315293 | 27935.8 |
| liv-i protein f | NCTC12722_01290 | Not Available | Positive | 1315296 - 1315991 | 25161.9 |
| Trna-met | Not Available | Not Available | Positive | 1316489 - 1316565 | Not Available |
| uncharacterised protein | NCTC12722_01292 | Not Available | Positive | 1316604 - 1317179 | 21074.1 |
| rebeccamycin o-methyltransferase | NCTC12722_01293 | Not Available | Negative | 1317082 - 1317720 | 23326.3 |
| pp_01267 | NCTC12722_01294 | Not Available | Negative | 1317735 - 1318916 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
