Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf448) | NCTC12722_00029 | Not Available | Positive | 31152 - 31829 | 23758.4 |
| translation initiation factor if-2 | NCTC12722_00030 | Not Available | Positive | 31871 - 34489 | 93709.0 |
| ribosome-binding factor a | NCTC12722_00031 | Not Available | Positive | 34626 - 35048 | 15510.5 |
| trna pseudouridine synthase b | NCTC12722_00032 | Not Available | Positive | 35048 - 36142 | 39552.0 |
| rrp-s15 | NCTC12722_00033 | Not Available | Positive | 36155 - 36424 | 10167.3 |
| polyribonucleotide nucleotidyltransferase | NCTC12722_00034 | Not Available | Positive | 36722 - 38866 | 77346.4 |
| superoxide dismutase | NCTC12722_00035 | Not Available | Positive | 39009 - 39752 | 26859.1 |
| morphology and auto-aggregation control protein | NCTC12722_00036 | Not Available | Negative | 39786 - 40709 | 33930.3 |
| catalase-peroxidase | NCTC12722_00037 | Not Available | Positive | 40898 - 43087 | 80398.1 |
| glutathione s-transferase gstb | NCTC12722_00038 | Not Available | Positive | 43221 - 43811 | 21610.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
