Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia felis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
827163 bp
Thymine Count
828388 bp
Guanine Count
1281645 bp
Cytosine Count
1278803 bp
Genome Length
4215999 bp
Protein-coding Genes
4035 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type taurine transport system, periplasmic component | NCTC12722_00934 | Not Available | Positive | 944289 - 944903 | 21803.7 |
| abc transporter, substrate-binding protein, aliphatic sulfonates family | NCTC12722_00935 | Not Available | Positive | 944952 - 945293 | 12940.6 |
| bicarbonate transport atp-binding protein cmpd | NCTC12722_00936 | Not Available | Positive | 945368 - 946135 | 28727.3 |
| putative aliphatic sulfonates transport permease protein ssuc | NCTC12722_00937 | Not Available | Positive | 946128 - 947024 | 32421.2 |
| biotin biosynthesis cytochrome p450 | NCTC12722_00938 | Not Available | Positive | 947294 - 948496 | 45997.1 |
| ferredoxin | NCTC12722_00939 | Not Available | Positive | 948493 - 948705 | 7405.83 |
| phthalate dioxygenase reductase | NCTC12722_00940 | Not Available | Positive | 948760 - 949809 | 38200.5 |
| hth-type transcriptional regulator frlr | NCTC12722_00941 | Not Available | Positive | 949913 - 950704 | 29117.0 |
| long-chain-fatty-acid--coa ligase | NCTC12722_00942 | Not Available | Positive | 951306 - 952841 | 55095.3 |
| domain of uncharacterised function (duf2088) | NCTC12722_00943 | Not Available | Positive | 952838 - 954253 | 51982.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cat scratch disease | Causes | PMC34658 |
| Cat-scratch disease (csd) | Causes | PMC4276836 |
| Cat scratch disease | Causes | PMC4398416 |
