Sphingobacterium mizutaii

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium mizutaii is a Gram-negative, rod-shaped bacterium that thrives in activated sludge environments, with an optimal growth temperature of 30.0°C. This species belongs to the genus Sphingobacterium, which is characterized by its ability to degrade complex organic compounds and contribute to the biogeochemical cycling of nutrients in aquatic ecosystems. The rod shape of S. mizutaii is typical of many members of the Sphingobacterium genus, which often exhibit diverse metabolic capabilities that allow them to adapt to varying ecological niches. The organism's Gram-negative status indicates a unique cell wall structure, which may influence its interactions with surrounding microorganisms and its resilience in fluctuating environmental conditions. As Sphingobacterium mizutaii occupies the niche of activated sludge, it plays a potential role in wastewater treatment processes by aiding in the breakdown of organic matter. This capability underscores its importance in bioremediation and environmental management. The adaptation to a specific temperature range highlights the species' ecological preference and potential implications for its activity in natural and engineered aquatic systems. Understanding the traits of S. mizutaii can inform strategies for optimizing microbial communities in wastewater treatment and enhancing the efficiency of nutrient cycling in these environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium mizutaii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium mizutaii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatactivated sludge
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium mizutaii strain DSM 11724 genome assembly,

Gene Summary

Adenine Count

1399465 bp

Thymine Count

1390011 bp

Guanine Count

914048 bp

Cytosine Count

924691 bp

Genome Length

4629350 bp

Protein-coding Genes

4026 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
a/g-specific dna-adenine glycosylaseSAMN05192578_104109Not AvailableNegative2913830 - 291487340511.5
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN05192578_104110Not AvailablePositive2915002 - 291586231679.3
pimeloyl-acp methyl ester carboxylesteraseSAMN05192578_104111Not AvailableNegative2915916 - 291695940387.0
iron complex transport system atp-binding proteinSAMN05192578_104112Not AvailableNegative2917012 - 291779129267.8
iron complex transport system permease proteinSAMN05192578_104113Not AvailableNegative2917791 - 291879536009.6
urease accessory proteinSAMN05192578_104114Not AvailableNegative2918830 - 291927917440.3
hydrogenase nickel incorporation protein hypbSAMN05192578_104115Not AvailableNegative2919279 - 291999225963.4
hydrogenase nickel incorporation protein hypa/hybfSAMN05192578_104116Not AvailableNegative2919985 - 292033813541.2
urease accessory proteinSAMN05192578_104117Not AvailableNegative2920340 - 292126935572.0
urease accessory proteinSAMN05192578_104118Not AvailableNegative2921281 - 292189522484.1

Displaying genes 2551 – 2560 of 4082 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
InfectionsCausesPMC7691896
CellulitisCausesPMC7691896
Necrotizing fasciitisCausesPMC7691896

Displaying health effects 1 – 3 of 3 in total