Thermoflexibacter ruber

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Thermoflexibacteraceae

Genus

Thermoflexibacter

Description

Thermoflexibacter ruber is characterized by having a single replicon and is represented in genomic databases by the accession number FONY00000000.1. This microbe's genomic structure indicates a streamlined genomic architecture, typical of certain thermophilic bacteria, which often reflects adaptations to extreme environments. The presence of a single replicon suggests that Thermoflexibacter ruber may exhibit efficient replication mechanisms, potentially facilitating rapid growth and adaptation to its thermal niche. This trait is significant for understanding the evolutionary pressures in high-temperature environments where such organisms thrive. While specific details regarding metabolic pathways, habitat preferences, or interactions with other microorganisms have not been provided, the genomic data implies a well-defined genetic framework that may contribute to the organism’s survival and functionality in thermophilic ecosystems. The unique genomic features of Thermoflexibacter ruber may also provide insights into the evolutionary adaptations required for life in extreme conditions, making it a candidate for further research in microbial ecology and biotechnology applications focused on thermophilic processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyThermoflexibacteraceae
GenusThermoflexibacter
SpeciesThermoflexibacter ruber
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flexibacter ruber strain GEY, DSM 9560 genome assembly, contig:

Gene Summary

Adenine Count

1711363 bp

Thymine Count

1711966 bp

Guanine Count

1036340 bp

Cytosine Count

1034506 bp

Genome Length

5504183 bp

Protein-coding Genes

4556 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine kinaseSAMN04488541_100484Not AvailableNegative858287 - 85930940020.5
outer membrane receptor proteins, mostly fe transportSAMN04488541_100485Not AvailablePositive859639 - 86203888580.1
uncharacterized membrane protein yeihSAMN04488541_100486Not AvailableNegative862424 - 86302922153.0
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN04488541_100487Not AvailableNegative863082 - 86378927172.1
2'-5' rna ligaseSAMN04488541_100488Not AvailablePositive863933 - 86448421809.3
atp-dependent hsluv protease atp-binding subunit hsluSAMN04488541_100489Not AvailablePositive864653 - 86601750977.8
adenosylmethionine-8-amino-7-oxononanoate aminotransferaseSAMN04488541_100490Not AvailablePositive866018 - 86727146708.9
hypothetical proteinSAMN04488541_100491Not AvailableNegative867303 - 8674013504.64
rna polymerase, sigma subunit, ecf familySAMN04488541_100492Not AvailableNegative867475 - 86807423241.2
gliding motility-associated lipoprotein gldk/gliding motility-associated lipoprotein gldk,tigr03529SAMN04488541_100493Not AvailableNegative868537 - 86966142195.6

Displaying genes 671 – 680 of 4603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.