Thermoflexibacter ruber

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Thermoflexibacteraceae

Genus

Thermoflexibacter

Description

Thermoflexibacter ruber is characterized by having a single replicon and is represented in genomic databases by the accession number FONY00000000.1. This microbe's genomic structure indicates a streamlined genomic architecture, typical of certain thermophilic bacteria, which often reflects adaptations to extreme environments. The presence of a single replicon suggests that Thermoflexibacter ruber may exhibit efficient replication mechanisms, potentially facilitating rapid growth and adaptation to its thermal niche. This trait is significant for understanding the evolutionary pressures in high-temperature environments where such organisms thrive. While specific details regarding metabolic pathways, habitat preferences, or interactions with other microorganisms have not been provided, the genomic data implies a well-defined genetic framework that may contribute to the organism’s survival and functionality in thermophilic ecosystems. The unique genomic features of Thermoflexibacter ruber may also provide insights into the evolutionary adaptations required for life in extreme conditions, making it a candidate for further research in microbial ecology and biotechnology applications focused on thermophilic processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyThermoflexibacteraceae
GenusThermoflexibacter
SpeciesThermoflexibacter ruber
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flexibacter ruber strain GEY, DSM 9560 genome assembly, contig:

Gene Summary

Adenine Count

1711363 bp

Thymine Count

1711966 bp

Guanine Count

1036340 bp

Cytosine Count

1034506 bp

Genome Length

5504183 bp

Protein-coding Genes

4556 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rubredoxinSAMN04488541_100329Not AvailablePositive571289 - 57279759117.4
assimilatory nitrite reductase (nad(p)h) large subunit precursorSAMN04488541_100330Not AvailablePositive573154 - 57564691689.2
assimilatory nitrite reductase (nad(p)h) small subunitSAMN04488541_100331Not AvailablePositive575740 - 57606912402.9
uroporphyrinogen-iii c-methyltransferaseSAMN04488541_100332Not AvailablePositive576400 - 57717928137.5
glycine hydroxymethyltransferaseSAMN04488541_100333Not AvailableNegative577243 - 57854147735.7
exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphataseSAMN04488541_100334Not AvailableNegative578621 - 57955035089.7
phosphoglycerate mutaseSAMN04488541_100335Not AvailableNegative579566 - 58107155065.0
hypothetical proteinSAMN04488541_100336Not AvailablePositive581283 - 58171717372.0
hypothetical proteinSAMN04488541_100337Not AvailablePositive581721 - 58203812036.2
deoxyribodipyrimidine photo-lyase family protein (cryptochrome)SAMN04488541_100338Not AvailablePositive582044 - 58352258359.1

Displaying genes 451 – 460 of 4603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.