Thermoflexibacter ruber

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Thermoflexibacteraceae

Genus

Thermoflexibacter

Description

Thermoflexibacter ruber is characterized by having a single replicon and is represented in genomic databases by the accession number FONY00000000.1. This microbe's genomic structure indicates a streamlined genomic architecture, typical of certain thermophilic bacteria, which often reflects adaptations to extreme environments. The presence of a single replicon suggests that Thermoflexibacter ruber may exhibit efficient replication mechanisms, potentially facilitating rapid growth and adaptation to its thermal niche. This trait is significant for understanding the evolutionary pressures in high-temperature environments where such organisms thrive. While specific details regarding metabolic pathways, habitat preferences, or interactions with other microorganisms have not been provided, the genomic data implies a well-defined genetic framework that may contribute to the organism’s survival and functionality in thermophilic ecosystems. The unique genomic features of Thermoflexibacter ruber may also provide insights into the evolutionary adaptations required for life in extreme conditions, making it a candidate for further research in microbial ecology and biotechnology applications focused on thermophilic processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyThermoflexibacteraceae
GenusThermoflexibacter
SpeciesThermoflexibacter ruber
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flexibacter ruber strain GEY, DSM 9560 genome assembly, contig:

Gene Summary

Adenine Count

1711363 bp

Thymine Count

1711966 bp

Guanine Count

1036340 bp

Cytosine Count

1034506 bp

Genome Length

5504183 bp

Protein-coding Genes

4556 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cellulose biosynthesis protein bcsqSAMN04488541_100319Not AvailableNegative555788 - 55645025008.2
riboflavin kinase / fmn adenylyltransferaseSAMN04488541_100320Not AvailableNegative556719 - 55767836796.8
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN04488541_100321Not AvailableNegative558991 - 55964424747.3
signal transduction histidine kinaseSAMN04488541_100322Not AvailableNegative559653 - 56112256246.4
alginate exportSAMN04488541_100323Not AvailablePositive562266 - 56385559340.1
nitrate/nitrite transport system substrate-binding proteinSAMN04488541_100324Not AvailablePositive563933 - 56513545161.9
nitrate/nitrite transport system permease proteinSAMN04488541_100325Not AvailablePositive565264 - 56604929050.5
bicarbonate transport system atp-binding proteinSAMN04488541_100326Not AvailablePositive566039 - 56692632868.2
ferredoxin-nitrate reductaseSAMN04488541_100327Not AvailablePositive567069 - 570587130968.0
conserved hypothetical proteinSAMN04488541_100328Not AvailablePositive570781 - 57123617579.5

Displaying genes 441 – 450 of 4603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.