Thermoflexibacter ruber

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Thermoflexibacteraceae

Genus

Thermoflexibacter

Description

Thermoflexibacter ruber is characterized by having a single replicon and is represented in genomic databases by the accession number FONY00000000.1. This microbe's genomic structure indicates a streamlined genomic architecture, typical of certain thermophilic bacteria, which often reflects adaptations to extreme environments. The presence of a single replicon suggests that Thermoflexibacter ruber may exhibit efficient replication mechanisms, potentially facilitating rapid growth and adaptation to its thermal niche. This trait is significant for understanding the evolutionary pressures in high-temperature environments where such organisms thrive. While specific details regarding metabolic pathways, habitat preferences, or interactions with other microorganisms have not been provided, the genomic data implies a well-defined genetic framework that may contribute to the organism’s survival and functionality in thermophilic ecosystems. The unique genomic features of Thermoflexibacter ruber may also provide insights into the evolutionary adaptations required for life in extreme conditions, making it a candidate for further research in microbial ecology and biotechnology applications focused on thermophilic processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyThermoflexibacteraceae
GenusThermoflexibacter
SpeciesThermoflexibacter ruber
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flexibacter ruber strain GEY, DSM 9560 genome assembly, contig:

Gene Summary

Adenine Count

1711363 bp

Thymine Count

1711966 bp

Guanine Count

1036340 bp

Cytosine Count

1034506 bp

Genome Length

5504183 bp

Protein-coding Genes

4556 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine/d-amino acid oxidaseSAMN04488541_1002102Not AvailableNegative411611 - 41275042702.9
dna-binding transcriptional regulator, xre-family hth domainSAMN04488541_1002103Not AvailableNegative412799 - 41314914027.0
protein of unknown function duf58SAMN04488541_1002104Not AvailablePositive413747 - 41462833524.7
hypothetical proteinSAMN04488541_1002105Not AvailableNegative414671 - 41573839870.3
hypothetical proteinSAMN04488541_1002106Not AvailableNegative415780 - 41636122665.3
rna polymerase sigma-70 factor, ecf subfamilySAMN04488541_1002107Not AvailableNegative416366 - 41696222893.3
sulfide:quinone oxidoreductaseSAMN04488541_1002108Not AvailablePositive417161 - 41836644590.6
protein of unknown functionSAMN04488541_1002109Not AvailablePositive418565 - 4187717296.41
crp/fnr family transcriptional regulator, anaerobic regulatory proteinSAMN04488541_1002110Not AvailablePositive418775 - 41939523851.2
glyoxylase, beta-lactamase superfamily iiSAMN04488541_1002111Not AvailablePositive419499 - 42092352010.3

Displaying genes 331 – 340 of 4603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.