Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase 1 | FLACOL_00042 | Not Available | Positive | 68081 - 68638 | 21688.7 |
| saccharopine dehydrogenase | FLACOL_00043 | Not Available | Negative | 69159 - 70511 | 51098.5 |
| hypothetical protein | FLACOL_00044 | Not Available | Positive | 70633 - 71019 | 14131.0 |
| phosphoenolpyruvate carboxykinase | FLACOL_00045 | Not Available | Positive | 71052 - 72713 | 61520.7 |
| pp_00042 | FLACOL_00046 | Not Available | Negative | 72761 - 73741 | Not Available |
| elongation factor 4 | FLACOL_00047 | Not Available | Positive | 74018 - 75814 | 66815.8 |
| sulfur carrier protein this | FLACOL_00048 | Not Available | Positive | 77094 - 77366 | 10064.5 |
| phosphomethylpyrimidine synthase | FLACOL_00049 | Not Available | Positive | 77505 - 79319 | 67909.9 |
| thiamine-phosphate pyrophosphorylase | FLACOL_00050 | Not Available | Positive | 79538 - 80110 | 21774.8 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | FLACOL_00051 | Not Available | Positive | 80077 - 80829 | 27901.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
