Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative neutral zinc metallopeptidase | FLACOL_00032 | Not Available | Positive | 57678 - 58376 | 25319.8 |
| regulatory protein asnc | FLACOL_00033 | Not Available | Negative | 58557 - 59027 | 17821.9 |
| leucine--trna ligase | FLACOL_00034 | Not Available | Negative | 59523 - 62387 | 108457.0 |
| pap2 superfamily protein | FLACOL_00035 | Not Available | Negative | 62445 - 63194 | 27575.5 |
| pap2 superfamily protein | FLACOL_00036 | Not Available | Negative | 63202 - 64203 | 36922.4 |
| cell division protein ftsx | FLACOL_00037 | Not Available | Positive | 64324 - 65199 | 33140.2 |
| hypothetical protein | FLACOL_00038 | Not Available | Positive | 65260 - 65508 | 9227.58 |
| undecaprenyl-diphosphatase | FLACOL_00039 | Not Available | Positive | 65585 - 66394 | 30343.0 |
| trna pseudouridine synthase b | FLACOL_00040 | Not Available | Positive | 66402 - 67106 | 26325.9 |
| hypothetical protein | FLACOL_00041 | Not Available | Negative | 67307 - 67933 | 23967.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
