Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron-encoded protein ltra | FLACOL_00001 | Not Available | Positive | 1621 - 2982 | 52299.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3168 - 4679 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 7877 - 7953 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 8064 - 8140 | Not Available |
| hypothetical protein | FLACOL_00006 | Not Available | Positive | 11813 - 12088 | 10121.1 |
| site-specific tyrosine recombinase xerc | FLACOL_00007 | Not Available | Negative | 12073 - 12414 | 13151.1 |
| hypothetical protein | FLACOL_00008 | Not Available | Negative | 13154 - 14695 | 53195.9 |
| transposase is116/is110/is902 family protein | FLACOL_00009 | Not Available | Positive | 14848 - 15444 | 22628.1 |
| mule transposase domain protein | FLACOL_00010 | Not Available | Positive | 17051 - 17773 | 28529.8 |
| hypothetical protein | FLACOL_00011 | Not Available | Negative | 18137 - 18526 | 14990.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
