Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | FLACOL_00817 | Not Available | Positive | 970541 - 971395 | 31344.9 |
| macrolide export atp-binding/permease protein macb | FLACOL_00818 | Not Available | Negative | 971572 - 972828 | 46437.1 |
| bifunctional purine biosynthesis protein purh | FLACOL_00819 | Not Available | Positive | 972939 - 974471 | 56422.7 |
| hypothetical protein | FLACOL_00820 | Not Available | Positive | 974827 - 975702 | 32408.5 |
| putative peroxiredoxin | FLACOL_00821 | Not Available | Positive | 975778 - 976428 | 24617.3 |
| rod shape-determining protein mreb | FLACOL_00822 | Not Available | Positive | 976550 - 977578 | 37385.0 |
| cell shape-determining protein mrec precursor | FLACOL_00823 | Not Available | Positive | 977685 - 978473 | 29502.6 |
| hypothetical protein | FLACOL_00824 | Not Available | Positive | 978466 - 978972 | 19436.4 |
| stage v sporulation protein d | FLACOL_00825 | Not Available | Positive | 978976 - 980925 | 73678.8 |
| rod shape-determining protein roda | FLACOL_00826 | Not Available | Positive | 980925 - 982181 | 46727.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
