Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | FLACOL_00757 | Not Available | Positive | 905907 - 906626 | 28023.8 |
| hypothetical protein | FLACOL_00758 | Not Available | Negative | 906636 - 907301 | 24012.3 |
| hypothetical protein | FLACOL_00759 | Not Available | Negative | 907307 - 908017 | 25661.4 |
| isoleucine--trna ligase | FLACOL_00760 | Not Available | Positive | 908351 - 911815 | 131071.0 |
| general stress protein 16o | FLACOL_00761 | Not Available | Positive | 911870 - 912250 | 14372.3 |
| lipoprotein signal peptidase | FLACOL_00762 | Not Available | Positive | 912365 - 912961 | 22504.8 |
| hypothetical protein | FLACOL_00763 | Not Available | Positive | 913040 - 913261 | 8462.6 |
| ribonuclease hi | FLACOL_00764 | Not Available | Negative | 913837 - 914316 | 18346.1 |
| phosphoribosylglycinamide formyltransferase | FLACOL_00765 | Not Available | Negative | 914329 - 914895 | 21241.7 |
| acyl carrier protein | FLACOL_00766 | Not Available | Positive | 915115 - 915351 | 8563.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
