Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nad(p)h-dependent fmn-containing oxidoreductase ywqn | FLACOL_00687 | Not Available | Positive | 824562 - 825053 | 19142.9 |
| vegetative protein 296 | FLACOL_00688 | Not Available | Positive | 825066 - 825815 | 27796.6 |
| fes cluster assembly protein sufd | FLACOL_00689 | Not Available | Positive | 826175 - 827491 | 49516.1 |
| cytochrome c551 peroxidase precursor | FLACOL_00690 | Not Available | Negative | 827646 - 828668 | 38496.1 |
| hypothetical protein | FLACOL_00691 | Not Available | Positive | 828896 - 829756 | 33022.9 |
| guanylate kinase | FLACOL_00692 | Not Available | Positive | 829831 - 830406 | 21962.3 |
| hypothetical protein | FLACOL_00693 | Not Available | Positive | 830487 - 830855 | 14019.0 |
| nicotinate-nucleotide adenylyltransferase | FLACOL_00694 | Not Available | Positive | 830930 - 831511 | 22815.4 |
| n-acetylmuramoyl-l-alanine amidase amid precursor | FLACOL_00695 | Not Available | Negative | 831572 - 832474 | 33784.7 |
| putative nicotinate phosphoribosyltransferase | FLACOL_00696 | Not Available | Negative | 833319 - 834767 | 54350.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
