Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative f0f1-atpase subunit (atpase_gene1) | FLACOL_00627 | Not Available | Positive | 757742 - 757972 | 8993.91 |
| hypothetical protein | FLACOL_00628 | Not Available | Positive | 757972 - 758343 | 14448.4 |
| atp synthase subunit a | FLACOL_00629 | Not Available | Positive | 758507 - 759715 | 44397.6 |
| f0f1 atp synthase subunit c | FLACOL_00630 | Not Available | Positive | 759776 - 759970 | 6141.89 |
| atp synthase subunit b | FLACOL_00631 | Not Available | Positive | 760059 - 760559 | 18913.0 |
| atp synthase subunit delta | FLACOL_00632 | Not Available | Positive | 760570 - 761103 | 19245.4 |
| atp synthase subunit alpha | FLACOL_00633 | Not Available | Positive | 761136 - 762713 | 56581.3 |
| atp synthase gamma chain | FLACOL_00634 | Not Available | Positive | 762788 - 763648 | 31371.8 |
| riboflavin synthase | FLACOL_00635 | Not Available | Negative | 763708 - 764298 | 21950.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase 1 | FLACOL_00636 | Not Available | Positive | 764353 - 765390 | 37870.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
