Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-binding factor a | FLACOL_00597 | Not Available | Positive | 727931 - 728323 | 14787.0 |
| lipoprotein-releasing system transmembrane protein lole | FLACOL_00598 | Not Available | Positive | 728328 - 729536 | 45014.7 |
| acyl-coa dehydrogenase | FLACOL_00599 | Not Available | Positive | 730070 - 731248 | 43526.4 |
| hypothetical protein | FLACOL_00600 | Not Available | Positive | 731275 - 732099 | 31898.7 |
| rhodocoxin | FLACOL_00601 | Not Available | Negative | 732180 - 732515 | 12306.0 |
| Trna-ala | Not Available | Not Available | Positive | 732575 - 732651 | Not Available |
| hypothetical protein | FLACOL_00603 | Not Available | Positive | 732715 - 733620 | 34931.6 |
| hypothetical protein | FLACOL_00604 | Not Available | Negative | 733865 - 734383 | 20102.9 |
| hypothetical protein | FLACOL_00605 | Not Available | Negative | 734383 - 735345 | 35799.7 |
| hypothetical protein | FLACOL_00606 | Not Available | Negative | 735332 - 735853 | 20052.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
