Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase a | FLACOL_00587 | Not Available | Positive | 714813 - 715817 | 36190.7 |
| hypothetical protein | FLACOL_00588 | Not Available | Positive | 715878 - 716096 | 8131.3 |
| biotin synthase | FLACOL_00589 | Not Available | Negative | 716106 - 717188 | 40256.3 |
| hypothetical protein | FLACOL_00590 | Not Available | Negative | 717294 - 718379 | 41645.6 |
| aquaporin z | FLACOL_00591 | Not Available | Negative | 718599 - 719276 | 23427.9 |
| riboflavin biosynthesis protein ribf | FLACOL_00592 | Not Available | Negative | 719512 - 720432 | 35084.5 |
| pregnancy-associated plasma protein-a | FLACOL_00593 | Not Available | Negative | 720492 - 722444 | 73399.7 |
| dna polymerase iii subunit alpha | FLACOL_00594 | Not Available | Negative | 722492 - 727027 | 172449.0 |
| Trna-met | Not Available | Not Available | Positive | 727280 - 727356 | Not Available |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | FLACOL_00596 | Not Available | Negative | 727442 - 727846 | 15125.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
