Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_00549 | FLACOL_00557 | Not Available | Positive | 685920 - 686357 | Not Available |
| hypothetical protein | FLACOL_00558 | Not Available | Negative | 686397 - 687008 | 21930.7 |
| hypothetical protein | FLACOL_00559 | Not Available | Negative | 687008 - 687211 | 7294.44 |
| hypothetical protein | FLACOL_00560 | Not Available | Negative | 687251 - 687826 | 20672.5 |
| hypothetical protein | FLACOL_00561 | Not Available | Positive | 687942 - 688508 | 21500.8 |
| ribonucleoside-diphosphate reductase subunit beta | FLACOL_00562 | Not Available | Positive | 688927 - 689904 | 37948.3 |
| ribonucleoside-diphosphate reductase 1 subunit alpha | FLACOL_00563 | Not Available | Positive | 690041 - 692452 | 91798.6 |
| putative n-acetyltransferase ysne | FLACOL_00564 | Not Available | Positive | 692605 - 693048 | 17225.5 |
| deoxyguanosinetriphosphate triphosphohydrolase | FLACOL_00565 | Not Available | Positive | 693480 - 694823 | 50919.7 |
| aminopeptidase ywad precursor | FLACOL_00566 | Not Available | Positive | 694883 - 697603 | 101168.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
