Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction atp-dependent dna helicase ruva | FLACOL_00547 | Not Available | Negative | 672400 - 672981 | 21290.0 |
| nadp-dependent malic enzyme | FLACOL_00548 | Not Available | Negative | 673065 - 675353 | 83997.2 |
| epoxyqueuosine reductase | FLACOL_00549 | Not Available | Negative | 675423 - 676349 | 35397.6 |
| holliday junction atp-dependent dna helicase ruvb | FLACOL_00550 | Not Available | Negative | 676373 - 677395 | 37457.1 |
| serine/threonine exchanger stet | FLACOL_00551 | Not Available | Positive | 677484 - 678893 | 51234.9 |
| translation initiation factor if-2 | FLACOL_00552 | Not Available | Negative | 679084 - 681996 | 107260.0 |
| hypothetical protein | FLACOL_00553 | Not Available | Negative | 682044 - 683288 | 47188.1 |
| hypothetical protein | FLACOL_00554 | Not Available | Negative | 683308 - 683790 | 18003.7 |
| putative universal stress protein | FLACOL_00555 | Not Available | Positive | 683947 - 684771 | 31034.2 |
| hypothetical protein | FLACOL_00556 | Not Available | Positive | 685325 - 685918 | 22370.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
