Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_00537 | Not Available | Positive | 658734 - 659087 | 13725.7 |
| hypothetical protein | FLACOL_00538 | Not Available | Positive | 659209 - 659529 | 12340.7 |
| hypothetical protein | FLACOL_00539 | Not Available | Positive | 659636 - 659998 | 14543.5 |
| hypothetical protein | FLACOL_00540 | Not Available | Positive | 660167 - 660490 | 12482.0 |
| hypothetical protein | FLACOL_00541 | Not Available | Positive | 660736 - 660984 | 9467.42 |
| hypothetical protein | FLACOL_00542 | Not Available | Negative | 661505 - 663592 | 80344.8 |
| deoxyribose-phosphate aldolase 1 | FLACOL_00543 | Not Available | Negative | 663605 - 664348 | 27391.7 |
| vanz like family protein | FLACOL_00544 | Not Available | Negative | 664411 - 664773 | 14011.6 |
| glycine cleavage system h protein | FLACOL_00545 | Not Available | Negative | 664763 - 665143 | 13941.4 |
| hypothetical protein | FLACOL_00546 | Not Available | Negative | 665212 - 672396 | 271272.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
