Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | FLACOL_00527 | Not Available | Positive | 648168 - 649373 | 45212.6 |
| hypothetical protein | FLACOL_00528 | Not Available | Positive | 649812 - 649961 | 5785.29 |
| adenine phosphoribosyltransferase | FLACOL_00529 | Not Available | Negative | 649948 - 650460 | 19192.6 |
| Trna-arg | Not Available | Not Available | Positive | 650552 - 650628 | Not Available |
| uvrabc system protein a | FLACOL_00531 | Not Available | Positive | 650794 - 653625 | 105642.0 |
| putative lysine decarboxylase | FLACOL_00532 | Not Available | Positive | 653700 - 654422 | 27455.9 |
| hypothetical protein | FLACOL_00533 | Not Available | Negative | 654631 - 654924 | 10536.6 |
| virulence regulon transcriptional activator virf | FLACOL_00534 | Not Available | Negative | 655025 - 655885 | 33459.0 |
| hypothetical protein | FLACOL_00535 | Not Available | Positive | 656633 - 657025 | 13825.0 |
| hypothetical protein | FLACOL_00536 | Not Available | Positive | 657028 - 658731 | 64738.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
