Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_00517 | Not Available | Positive | 627514 - 638019 | 389433.0 |
| peptidase s46 | FLACOL_00518 | Not Available | Positive | 638145 - 640295 | 80816.6 |
| hypothetical protein | FLACOL_00519 | Not Available | Positive | 640658 - 641344 | 26528.2 |
| hypothetical protein | FLACOL_00520 | Not Available | Negative | 641347 - 642219 | 33557.0 |
| hypothetical protein | FLACOL_00521 | Not Available | Negative | 642330 - 642800 | 18242.4 |
| hypothetical protein | FLACOL_00522 | Not Available | Negative | 642833 - 643495 | 25300.0 |
| transposase | FLACOL_00523 | Not Available | Negative | 643687 - 643941 | 9982.26 |
| bacterial sh3 domain protein | FLACOL_00524 | Not Available | Negative | 644004 - 645128 | 44082.1 |
| hypothetical protein | FLACOL_00525 | Not Available | Negative | 645155 - 645979 | 30813.8 |
| succinyl-coa ligase | FLACOL_00526 | Not Available | Negative | 646720 - 647913 | 43097.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
