Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_00497 | Not Available | Negative | 607971 - 608867 | 34559.9 |
| putative periplasmic serine endoprotease degp-like precursor | FLACOL_00498 | Not Available | Positive | 608902 - 610350 | 55168.6 |
| hypothetical protein | FLACOL_00499 | Not Available | Negative | 610552 - 611277 | 28571.0 |
| hypothetical protein | FLACOL_00500 | Not Available | Negative | 611282 - 611614 | 12887.5 |
| hypothetical protein | FLACOL_00501 | Not Available | Negative | 611670 - 612173 | 19443.5 |
| hypothetical protein | FLACOL_00502 | Not Available | Positive | 612322 - 612471 | 5927.29 |
| hicb family protein | FLACOL_00503 | Not Available | Positive | 612567 - 612941 | 14043.7 |
| vancomycin high temperature exclusion protein | FLACOL_00504 | Not Available | Negative | 613113 - 613772 | 25243.5 |
| oligopeptidase a | FLACOL_00505 | Not Available | Negative | 613791 - 615818 | 77630.1 |
| n5-carboxyaminoimidazole ribonucleotide mutase | FLACOL_00506 | Not Available | Negative | 616085 - 616702 | 21931.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
