Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase g | FLACOL_00487 | Not Available | Negative | 588034 - 588654 | 23594.4 |
| stearoyl-coa 9-desaturase | FLACOL_00488 | Not Available | Positive | 588761 - 589855 | 42808.3 |
| aspartate aminotransferase | FLACOL_00489 | Not Available | Positive | 589956 - 591143 | 43547.2 |
| hypothetical protein | FLACOL_00490 | Not Available | Positive | 592302 - 592688 | 14407.9 |
| hypothetical protein | FLACOL_00491 | Not Available | Negative | 593220 - 593573 | 13279.8 |
| glycine dehydrogenase (decarboxylating) | FLACOL_00492 | Not Available | Negative | 594956 - 597805 | 103899.0 |
| hypothetical protein | FLACOL_00493 | Not Available | Positive | 597965 - 603670 | 212229.0 |
| ribosomal-protein-alanine n-acetyltransferase | FLACOL_00494 | Not Available | Positive | 603784 - 604629 | 32571.6 |
| penicillin-binding protein 1f | FLACOL_00495 | Not Available | Positive | 604669 - 607035 | 90222.4 |
| prenyltransferase | FLACOL_00496 | Not Available | Positive | 607028 - 607837 | 31054.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
