Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin v secretion protein cvaa | FLACOL_00477 | Not Available | Negative | 571720 - 573072 | 51256.5 |
| lipid a export atp-binding/permease protein msba | FLACOL_00478 | Not Available | Negative | 573076 - 574728 | 62635.1 |
| hypothetical protein | FLACOL_00479 | Not Available | Negative | 574725 - 575396 | 26220.5 |
| hypothetical protein | FLACOL_00480 | Not Available | Positive | 575561 - 577795 | 88311.8 |
| high-affinity na(+)/h(+) antiporter nhas3 | FLACOL_00481 | Not Available | Negative | 577778 - 580048 | 84005.5 |
| preprotein translocase subunit secf | FLACOL_00482 | Not Available | Positive | 580221 - 582638 | 91064.3 |
| hypothetical protein | FLACOL_00483 | Not Available | Negative | 583011 - 583118 | 4450.46 |
| asparagine--trna ligase | FLACOL_00484 | Not Available | Positive | 583265 - 584710 | 55139.7 |
| rna polymerase sigma-54 factor | FLACOL_00485 | Not Available | Positive | 584784 - 586253 | 56650.1 |
| hypothetical protein | FLACOL_00486 | Not Available | Negative | 587070 - 587474 | 15657.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
